{"name":"napari-ome-zarr","display_name":"napari-ome-zarr","visibility":"public","icon":"","categories":[],"schema_version":"0.1.0","on_activate":null,"on_deactivate":null,"contributions":{"commands":[{"id":"napari-ome-zarr.get_reader","title":"Get Reader","python_name":"napari_ome_zarr._reader:napari_get_reader","short_title":null,"category":null,"icon":null,"enablement":null}],"readers":[{"command":"napari-ome-zarr.get_reader","filename_patterns":["*.zarr","*.zarr*"],"accepts_directories":true}],"writers":null,"widgets":null,"sample_data":null,"themes":null,"menus":{},"submenus":null,"keybindings":null,"configuration":[]},"package_metadata":{"metadata_version":"2.1","name":"napari-ome-zarr","version":"0.5.2","dynamic":null,"platform":null,"supported_platform":null,"summary":"A reader for zarr backed OME-NGFF images.","description":"# napari-ome-zarr\n\n[![License](https://img.shields.io/pypi/l/napari-ome-zarr.svg?color=green)](https://github.com/ome/napari-ome-zarr/raw/master/LICENSE)\n[![PyPI](https://img.shields.io/pypi/v/napari-ome-zarr.svg?color=green)](https://pypi.org/project/napari-ome-zarr)\n[![Python Version](https://img.shields.io/pypi/pyversions/napari-ome-zarr.svg?color=green)](https://python.org)\n[![tests](https://github.com/ome/napari-ome-zarr/workflows/tests/badge.svg)](https://github.com/ome/napari-ome-zarr/actions)\n[![codecov](https://codecov.io/gh/ome/napari-ome-zarr/branch/master/graph/badge.svg)](https://codecov.io/gh/ome/napari-ome-zarr)\n[![pre-commit.ci status](https://results.pre-commit.ci/badge/github/ome/napari-ome-zarr/main.svg)](https://results.pre-commit.ci/latest/github/ome/napari-ome-zarr/main)\n\n\nA reader for zarr backed OME-NGFF images.\n\n----------------------------------\n\nThis [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template.\n\n<!--\nDon't miss the full getting started guide to set up your new package:\nhttps://github.com/napari/cookiecutter-napari-plugin#getting-started\n\nand review the napari docs for plugin developers:\nhttps://napari.org/docs/plugins/index.html\n-->\n\n## Installation\n\nYou can install `napari-ome-zarr` via [pip]:\n\n    pip install napari-ome-zarr\n\n## Usage\n\nNapari will use `ome-zarr` to open images that the plugin recognises as ome-zarr.\nThe image metadata from OMERO will be used to set channel names and rendering settings\nin napari::\n\n    $ napari \"https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.3/9836842.zarr/\"\n\n\n    # Also works with local files\n    $ napari 6001240.zarr\n\nOR in python::\n\n    import napari\n\n    viewer = napari.Viewer()\n    viewer.open('https://uk1s3.embassy.ebi.ac.uk/idr/zarr/v0.3/9836842.zarr/')\n\n    napari.run()\n\nIf single zarray is passed to the plugin, it will be opened without the use of\nthe metadata::\n\n    $ napari '/tmp/6001240.zarr/0'\n\n## Contributing\n\nContributions are very welcome. Tests can be run with [tox], please ensure\nthe coverage at least stays the same before you submit a pull request.\n\n## License\n\nDistributed under the terms of the [BSD-3] license,\n\"napari-ome-zarr\" is free and open source software\n\n## Issues\n\nIf you encounter any problems, please [file an issue] along with a detailed description.\n\n[napari]: https://github.com/napari/napari\n[Cookiecutter]: https://github.com/audreyr/cookiecutter\n[@napari]: https://github.com/napari\n[MIT]: http://opensource.org/licenses/MIT\n[BSD-3]: http://opensource.org/licenses/BSD-3-Clause\n[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt\n[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt\n[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0\n[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt\n[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin\n[file an issue]: https://github.com/ome/napari-ome-zarr/issues\n[napari]: https://github.com/napari/napari\n[tox]: https://tox.readthedocs.io/en/latest/\n[pip]: https://pypi.org/project/pip/\n[PyPI]: https://pypi.org/\n","description_content_type":"text/markdown","keywords":null,"home_page":"https://github.com/ome/napari-ome-zarr","download_url":null,"author":"OME Team","author_email":"ome-team@openmicroscopy.org","maintainer":null,"maintainer_email":null,"license":"BSD-3","classifier":["Development Status :: 4 - Beta","Intended Audience :: Developers","Framework :: napari","Topic :: Software Development :: Testing","Programming Language :: Python","Programming Language :: Python :: 3","Programming Language :: Python :: 3.8","Programming Language :: Python :: 3.9","Programming Language :: Python :: 3.10","Operating System :: OS Independent","License :: OSI Approved :: BSD License"],"requires_dist":["ome-zarr (>=0.3.0)","numpy","vispy","napari (>=0.4.13)"],"requires_python":">=3.7","requires_external":null,"project_url":["Bug Tracker, https://github.com/ome/napari-ome-zarr/issues","Documentation, https://github.com/ome/napari-ome-zarr#README.md","Source Code, https://github.com/ome/napari-ome-zarr","User Support, https://github.com/ome/napari-ome-zarr/issues","Twitter, https://twitter.com/openmicroscopy"],"provides_extra":null,"provides_dist":null,"obsoletes_dist":null},"npe1_shim":false}